A Python tool for finding outliers in RNA-Seq gene expression count data using SVD/OHT

OutSingle has been tested on Windows (11). Note that OutSingle is still in alpha stage, so encountering bugs while running it is expected. If you use OutSingle in your research you can cite our paper:
Edin Salkovic, Mohammad Amin Sadeghi, Abdelkader Baggag, Ahmed Gamal Rashed Salem, Halima Bensmail, OutSingle: A Novel Method of Detecting and Injecting Outliers in RNA-seq Count Data Using the Optimal Hard Threshold for Singular Values, Bioinformatics, 2023;, btad142, https://doi.org/10.1093/bioinformatics/btad142

And please also check our other older models (both have related published papers):
https://github.com/esalkovic/outpyr
https://github.com/esalkovic/outpyrx